arrange_probabel_phe

arrange_probabel_phe {GenABEL}R Documentation

arrange_probabel_phe

Description

arranges ProbABEL phenotype-file

Usage

arrange_probabel_phe(modelterms, phedata, gendata, file="probabel.PHE")

Arguments

modelterms vector of character, which specifies the variables to be included into ProbABEL phenotype-file. Should contain, and start with 'id' column, which should provide the same ID codes as these in gendata
phedata phenotypic data (matrix, data.frame, or gwaa.data-class object)
gendata genetic data to be used with ProbABEL, either databel-class object or name of the (index/data) file containing filevector data for ProbABEL
file name of the ProbABEL phenotype file

Details

Function to arrange ProbABEL phenotype-file; it takes phenotypic data as input and aligns that with genotypic data of ProbABEL

Value

file with phenotypes ready for use with ProbABEL

Author(s)

Yurii Aulchenko


[Package GenABEL version 1.6-7 Index]