impute2databel

impute2databel {GenABEL}R Documentation

impute2databel

Description

converts IMPUTE-imputed files to DatABEL (filevector) format

Usage

impute2databel(genofile, samplefile, outfile, makeprob=TRUE, old=FALSE)

Arguments

genofile IMPUTE genotype file name
samplefile IMPUTE sample file name
outfile output file name
makeprob wheather probability-files are also to be arranged
old for developers' use

Details

this function converts IMPUTE-imputed files to DatABEL (filevector) format containing estimated dosages. After conversion, two files (outfile.fvi and outfile.fvd), corresponding to single filevector object, will appear on the disk; 'databel-class' object connected to these files will be returned to R.

Value

'databel-class' object


[Package GenABEL version 1.6-7 Index]